A curated catalogue of human genomic structural variation




Variant Details

Variant: nsv4339997



Internal ID20187215
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
chr20:37912378..37920018hg38UCSC Ensembl
chr20:36540780..36548420hg19UCSC Ensembl
Cytoband20q11.23
Allele length
AssemblyAllele length
hg387641
hg197641
Variant TypeOTHER sequence alteration
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusM
Merged Variants
Supporting Variantsnssv15789244
Samples
Known GenesVSTM2L
MethodSequencing
AnalysisSV calls were generated using multi-algorithm consensus pipeline involving raw evidence assessment, filtering, clustering, genotyping, alternative allele structure resolution, and gene annotation. These methods are described in detail in the gnomAD-SV preprint [Collins*, Brand*, et al., bioRxiv (2019)|https://www.biorxiv.org/content/10.1101/578674v1], and are largely based on methods developed in [Werling et al., Nat. Genet. (2018)|https://www.ncbi.nlm.nih.gov/pubmed/29700473].
Platform
Commentscomplex variant
ReferencegnomAD_Structural_Variants
Pubmed ID32461652
Accession Number(s)nsv4339997
Frequency
Sample Size10847
Observed Gain0
Observed Loss0
Observed Complex0
Frequencyn/a


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