A curated catalogue of human genomic structural variation




Variant Details

Variant: nsv4318527



Internal ID19838148
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
chr5:167439473..168940435hg38UCSC Ensembl
chr5:166866478..168367440hg19UCSC Ensembl
Cytoband5q34
Allele length
AssemblyAllele length
hg381500963
hg191500963
Variant TypeOTHER inversion
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusM
Merged Variants
Supporting Variantsnssv16091382
Samples
Known GenesFBLL1, MIR103A1, MIR103B1, MIR218-2, PANK3, RARS, SLIT3, TENM2, WWC1
MethodSequencing
AnalysisSV calls were generated using multi-algorithm consensus pipeline involving raw evidence assessment, filtering, clustering, genotyping, alternative allele structure resolution, and gene annotation. These methods are described in detail in the gnomAD-SV preprint [Collins*, Brand*, et al., bioRxiv (2019)|https://www.biorxiv.org/content/10.1101/578674v1], and are largely based on methods developed in [Werling et al., Nat. Genet. (2018)|https://www.ncbi.nlm.nih.gov/pubmed/29700473].
Platform
Comments
ReferencegnomAD_Structural_Variants
Pubmed ID12345678
Accession Number(s)nsv4318527
Frequency
Sample Size10847
Observed Gain0
Observed Loss0
Observed Complex0
Frequencyn/a


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