A curated catalogue of human genomic structural variation




Variant Details

Variant: nsv4283582



Internal ID20117982
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
chr20:44719345..44726389hg38UCSC Ensembl
chr20:43347986..43355030hg19UCSC Ensembl
Cytoband20q13.12
Allele length
AssemblyAllele length
hg387045
hg197045
Variant TypeCNV deletion
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusM
Merged Variants
Supporting Variantsnssv15858657
Samples
Known GenesWISP2
MethodSequencing
AnalysisSV calls were generated using multi-algorithm consensus pipeline involving raw evidence assessment, filtering, clustering, genotyping, alternative allele structure resolution, and gene annotation. These methods are described in detail in the gnomAD-SV preprint [Collins*, Brand*, et al., bioRxiv (2019)|https://www.biorxiv.org/content/10.1101/578674v1], and are largely based on methods developed in [Werling et al., Nat. Genet. (2018)|https://www.ncbi.nlm.nih.gov/pubmed/29700473].
Platform
Comments
ReferencegnomAD_Structural_Variants
Pubmed ID12345678
Accession Number(s)nsv4283582
Frequency
Sample Size10847
Observed Gain0
Observed Loss1
Observed Complex0
Frequencyn/a


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