A curated catalogue of human genomic structural variation




Variant Details

Variant: nsv4283180



Internal ID20464480
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
chr22:44837184..44861234hg38UCSC Ensembl
chr22:45233064..45257114hg19UCSC Ensembl
Cytoband22q13.31
Allele length
AssemblyAllele length
hg3824051
hg1924051
Variant TypeCNV deletion
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusM
Merged Variants
Supporting Variantsnssv15866122
Samples
Known GenesARHGAP8, PRR5-ARHGAP8
MethodSequencing
AnalysisSV calls were generated using multi-algorithm consensus pipeline involving raw evidence assessment, filtering, clustering, genotyping, alternative allele structure resolution, and gene annotation. These methods are described in detail in the gnomAD-SV preprint [Collins*, Brand*, et al., bioRxiv (2019)|https://www.biorxiv.org/content/10.1101/578674v1], and are largely based on methods developed in [Werling et al., Nat. Genet. (2018)|https://www.ncbi.nlm.nih.gov/pubmed/29700473].
Platform
Comments
ReferencegnomAD_Structural_Variants
Pubmed ID32461652
Accession Number(s)nsv4283180
Frequency
Sample Size10847
Observed Gain0
Observed Loss1
Observed Complex0
Frequencyn/a


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