A curated catalogue of human genomic structural variation




Variant Details

Variant: nsv4278009



Internal ID20462215
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
chr20:23668258..23758618hg38UCSC Ensembl
chr20:23648895..23739255hg19UCSC Ensembl
Cytoband20p11.21
Allele length
AssemblyAllele length
hg3890361
hg1990361
Variant TypeCNV duplication
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusM
Merged Variants
Supporting Variantsnssv15963890
Samples
Known GenesCST1, CST4
MethodSequencing
AnalysisSV calls were generated using multi-algorithm consensus pipeline involving raw evidence assessment, filtering, clustering, genotyping, alternative allele structure resolution, and gene annotation. These methods are described in detail in the gnomAD-SV preprint [Collins*, Brand*, et al., bioRxiv (2019)|https://www.biorxiv.org/content/10.1101/578674v1], and are largely based on methods developed in [Werling et al., Nat. Genet. (2018)|https://www.ncbi.nlm.nih.gov/pubmed/29700473].
Platform
Comments
ReferencegnomAD_Structural_Variants
Pubmed ID32461652
Accession Number(s)nsv4278009
Frequency
Sample Size10847
Observed Gain1
Observed Loss0
Observed Complex0
Frequencyn/a


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