A curated catalogue of human genomic structural variation




Variant Details

Variant: nsv4266811



Internal ID20109163
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
chr19:51334407..51369163hg38UCSC Ensembl
chr19:51837661..51872417hg19UCSC Ensembl
Cytoband19q13.41
Allele length
AssemblyAllele length
hg3834757
hg1934757
Variant TypeCNV deletion
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusM
Merged Variants
Supporting Variantsnssv15845372
Samples
Known GenesCLDND2, ETFB, VSIG10L
MethodSequencing
AnalysisSV calls were generated using multi-algorithm consensus pipeline involving raw evidence assessment, filtering, clustering, genotyping, alternative allele structure resolution, and gene annotation. These methods are described in detail in the gnomAD-SV preprint [Collins*, Brand*, et al., bioRxiv (2019)|https://www.biorxiv.org/content/10.1101/578674v1], and are largely based on methods developed in [Werling et al., Nat. Genet. (2018)|https://www.ncbi.nlm.nih.gov/pubmed/29700473].
Platform
Comments
ReferencegnomAD_Structural_Variants
Pubmed ID12345678
Accession Number(s)nsv4266811
Frequency
Sample Size10847
Observed Gain0
Observed Loss1
Observed Complex0
Frequencyn/a


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