A curated catalogue of human genomic structural variation




Variant Details

Variant: nsv4264517



Internal ID20107558
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
chr17:38903739..38906005hg38UCSC Ensembl
chr17:37059992..37062258hg19UCSC Ensembl
Cytoband17q12
Allele length
AssemblyAllele length
hg382267
hg192267
Variant TypeCNV deletion
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusM
Merged Variants
Supporting Variantsnssv15836208
Samples
Known GenesLASP1
MethodSequencing
AnalysisSV calls were generated using multi-algorithm consensus pipeline involving raw evidence assessment, filtering, clustering, genotyping, alternative allele structure resolution, and gene annotation. These methods are described in detail in the gnomAD-SV preprint [Collins*, Brand*, et al., bioRxiv (2019)|https://www.biorxiv.org/content/10.1101/578674v1], and are largely based on methods developed in [Werling et al., Nat. Genet. (2018)|https://www.ncbi.nlm.nih.gov/pubmed/29700473].
Platform
Comments
ReferencegnomAD_Structural_Variants
Pubmed ID12345678
Accession Number(s)nsv4264517
Frequency
Sample Size10847
Observed Gain0
Observed Loss1
Observed Complex0
Frequencyn/a


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