A curated catalogue of human genomic structural variation




Variant Details

Variant: nsv4264229



Internal ID20454036
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
chr19:47522155..47522921hg38UCSC Ensembl
chr19:48025412..48026178hg19UCSC Ensembl
Cytoband19q13.33
Allele length
AssemblyAllele length
hg38767
hg19767
Variant TypeCNV deletion
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusM
Merged Variants
Supporting Variantsnssv15846461
Samples
Known GenesZNF541
MethodSequencing
AnalysisSV calls were generated using multi-algorithm consensus pipeline involving raw evidence assessment, filtering, clustering, genotyping, alternative allele structure resolution, and gene annotation. These methods are described in detail in the gnomAD-SV preprint [Collins*, Brand*, et al., bioRxiv (2019)|https://www.biorxiv.org/content/10.1101/578674v1], and are largely based on methods developed in [Werling et al., Nat. Genet. (2018)|https://www.ncbi.nlm.nih.gov/pubmed/29700473].
Platform
Comments
ReferencegnomAD_Structural_Variants
Pubmed ID32461652
Accession Number(s)nsv4264229
Frequency
Sample Size10847
Observed Gain0
Observed Loss1
Observed Complex0
Frequencyn/a


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