A curated catalogue of human genomic structural variation




Variant Details

Variant: nsv4260617



Internal ID20104829
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
chr19:3490751..3500484hg38UCSC Ensembl
chr19:3490749..3500482hg19UCSC Ensembl
Cytoband19p13.3
Allele length
AssemblyAllele length
hg389734
hg199734
Variant TypeCNV duplication
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusM
Merged Variants
Supporting Variantsnssv15962125
Samples
Known GenesDOHH
MethodSequencing
AnalysisSV calls were generated using multi-algorithm consensus pipeline involving raw evidence assessment, filtering, clustering, genotyping, alternative allele structure resolution, and gene annotation. These methods are described in detail in the gnomAD-SV preprint [Collins*, Brand*, et al., bioRxiv (2019)|https://www.biorxiv.org/content/10.1101/578674v1], and are largely based on methods developed in [Werling et al., Nat. Genet. (2018)|https://www.ncbi.nlm.nih.gov/pubmed/29700473].
Platform
Comments
ReferencegnomAD_Structural_Variants
Pubmed ID12345678
Accession Number(s)nsv4260617
Frequency
Sample Size10847
Observed Gain1
Observed Loss0
Observed Complex0
Frequencyn/a


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