A curated catalogue of human genomic structural variation




Variant Details

Variant: nsv4260577



Internal ID20451485
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
chr19:33032185..33036218hg38UCSC Ensembl
chr19:33523091..33527124hg19UCSC Ensembl
Cytoband19q13.11
Allele length
AssemblyAllele length
hg384034
hg194034
Variant TypeCNV deletion
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusM
Merged Variants
Supporting Variantsnssv15843550
Samples
Known GenesRHPN2
MethodSequencing
AnalysisSV calls were generated using multi-algorithm consensus pipeline involving raw evidence assessment, filtering, clustering, genotyping, alternative allele structure resolution, and gene annotation. These methods are described in detail in the gnomAD-SV preprint [Collins*, Brand*, et al., bioRxiv (2019)|https://www.biorxiv.org/content/10.1101/578674v1], and are largely based on methods developed in [Werling et al., Nat. Genet. (2018)|https://www.ncbi.nlm.nih.gov/pubmed/29700473].
Platform
Comments
ReferencegnomAD_Structural_Variants
Pubmed ID32461652
Accession Number(s)nsv4260577
Frequency
Sample Size10847
Observed Gain0
Observed Loss1
Observed Complex0
Frequencyn/a


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