A curated catalogue of human genomic structural variation




Variant Details

Variant: nsv4259840



Internal ID20450983
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
chr19:35504874..35518130hg38UCSC Ensembl
chr19:35995776..36009032hg19UCSC Ensembl
Cytoband19q13.12
Allele length
AssemblyAllele length
hg3813257
hg1913257
Variant TypeCNV duplication
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusM
Merged Variants
Supporting Variantsnssv15961591
Samples
Known GenesDMKN
MethodSequencing
AnalysisSV calls were generated using multi-algorithm consensus pipeline involving raw evidence assessment, filtering, clustering, genotyping, alternative allele structure resolution, and gene annotation. These methods are described in detail in the gnomAD-SV preprint [Collins*, Brand*, et al., bioRxiv (2019)|https://www.biorxiv.org/content/10.1101/578674v1], and are largely based on methods developed in [Werling et al., Nat. Genet. (2018)|https://www.ncbi.nlm.nih.gov/pubmed/29700473].
Platform
Comments
ReferencegnomAD_Structural_Variants
Pubmed ID32461652
Accession Number(s)nsv4259840
Frequency
Sample Size10847
Observed Gain1
Observed Loss0
Observed Complex0
Frequencyn/a


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