A curated catalogue of human genomic structural variation




Variant Details

Variant: nsv4259791



Internal ID20104261
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
chr18:24474848..24482142hg38UCSC Ensembl
chr18:22054812..22062106hg19UCSC Ensembl
Cytoband18q11.2
Allele length
AssemblyAllele length
hg387295
hg197295
Variant TypeCNV duplication
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusM
Merged Variants
Supporting Variantsnssv15959073
Samples
Known GenesHRH4
MethodSequencing
AnalysisSV calls were generated using multi-algorithm consensus pipeline involving raw evidence assessment, filtering, clustering, genotyping, alternative allele structure resolution, and gene annotation. These methods are described in detail in the gnomAD-SV preprint [Collins*, Brand*, et al., bioRxiv (2019)|https://www.biorxiv.org/content/10.1101/578674v1], and are largely based on methods developed in [Werling et al., Nat. Genet. (2018)|https://www.ncbi.nlm.nih.gov/pubmed/29700473].
Platform
Comments
ReferencegnomAD_Structural_Variants
Pubmed ID12345678
Accession Number(s)nsv4259791
Frequency
Sample Size10847
Observed Gain1
Observed Loss0
Observed Complex0
Frequencyn/a


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