A curated catalogue of human genomic structural variation




Variant Details

Variant: nsv4255192



Internal ID20101023
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
chr18:59858648..60641689hg38UCSC Ensembl
chr18:57525880..58308922hg19UCSC Ensembl
Cytoband18q21.32
Allele length
AssemblyAllele length
hg38783042
hg19783043
Variant TypeCNV duplication
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusM
Merged Variants
Supporting Variantsnssv15960317
Samples
Known GenesMC4R, PMAIP1
MethodSequencing
AnalysisSV calls were generated using multi-algorithm consensus pipeline involving raw evidence assessment, filtering, clustering, genotyping, alternative allele structure resolution, and gene annotation. These methods are described in detail in the gnomAD-SV preprint [Collins*, Brand*, et al., bioRxiv (2019)|https://www.biorxiv.org/content/10.1101/578674v1], and are largely based on methods developed in [Werling et al., Nat. Genet. (2018)|https://www.ncbi.nlm.nih.gov/pubmed/29700473].
Platform
Comments
ReferencegnomAD_Structural_Variants
Pubmed ID12345678
Accession Number(s)nsv4255192
Frequency
Sample Size10847
Observed Gain1
Observed Loss0
Observed Complex0
Frequencyn/a


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