A curated catalogue of human genomic structural variation




Variant Details

Variant: nsv4254017



Internal ID20446905
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
chr19:11270967..11277619hg38UCSC Ensembl
chr19:11381643..11388295hg19UCSC Ensembl
Cytoband19p13.2
Allele length
AssemblyAllele length
hg386653
hg196653
Variant TypeCNV deletion
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusM
Merged Variantsdgv1120n166
Supporting Variantsnssv15842633
Samples
Known Genes
MethodSequencing
AnalysisSV calls were generated using multi-algorithm consensus pipeline involving raw evidence assessment, filtering, clustering, genotyping, alternative allele structure resolution, and gene annotation. These methods are described in detail in the gnomAD-SV preprint [Collins*, Brand*, et al., bioRxiv (2019)|https://www.biorxiv.org/content/10.1101/578674v1], and are largely based on methods developed in [Werling et al., Nat. Genet. (2018)|https://www.ncbi.nlm.nih.gov/pubmed/29700473].
Platform
Comments
ReferencegnomAD_Structural_Variants
Pubmed ID32461652
Accession Number(s)nsv4254017
Frequency
Sample Size10847
Observed Gain0
Observed Loss1
Observed Complex0
Frequencyn/a


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