A curated catalogue of human genomic structural variation




Variant Details

Variant: nsv4251248



Internal ID20445006
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
chr16:28698679..28706029hg38UCSC Ensembl
chr16:28710000..28717350hg19UCSC Ensembl
Cytoband16p11.2
Allele length
AssemblyAllele length
hg387351
hg197351
Variant TypeCNV deletion
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusM
Merged Variants
Supporting Variantsnssv15829638
Samples
Known GenesEIF3C
MethodSequencing
AnalysisSV calls were generated using multi-algorithm consensus pipeline involving raw evidence assessment, filtering, clustering, genotyping, alternative allele structure resolution, and gene annotation. These methods are described in detail in the gnomAD-SV preprint [Collins*, Brand*, et al., bioRxiv (2019)|https://www.biorxiv.org/content/10.1101/578674v1], and are largely based on methods developed in [Werling et al., Nat. Genet. (2018)|https://www.ncbi.nlm.nih.gov/pubmed/29700473].
Platform
Comments
ReferencegnomAD_Structural_Variants
Pubmed ID32461652
Accession Number(s)nsv4251248
Frequency
Sample Size10847
Observed Gain0
Observed Loss1
Observed Complex0
Frequencyn/a


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