A curated catalogue of human genomic structural variation




Variant Details

Variant: nsv4250136



Internal ID20444267
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
chr15:85723465..85770384hg38UCSC Ensembl
chr15:86266696..86313615hg19UCSC Ensembl
Cytoband15q25.3
Allele length
AssemblyAllele length
hg3846920
hg1946920
Variant TypeCNV duplication
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusM
Merged Variants
Supporting Variantsnssv15957084
Samples
Known GenesAKAP13, KLHL25
MethodSequencing
AnalysisSV calls were generated using multi-algorithm consensus pipeline involving raw evidence assessment, filtering, clustering, genotyping, alternative allele structure resolution, and gene annotation. These methods are described in detail in the gnomAD-SV preprint [Collins*, Brand*, et al., bioRxiv (2019)|https://www.biorxiv.org/content/10.1101/578674v1], and are largely based on methods developed in [Werling et al., Nat. Genet. (2018)|https://www.ncbi.nlm.nih.gov/pubmed/29700473].
Platform
Comments
ReferencegnomAD_Structural_Variants
Pubmed ID32461652
Accession Number(s)nsv4250136
Frequency
Sample Size10847
Observed Gain1
Observed Loss0
Observed Complex0
Frequencyn/a


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