A curated catalogue of human genomic structural variation




Variant Details

Variant: nsv4249803



Internal ID20444055
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
chr15:38470617..38475121hg38UCSC Ensembl
chr15:38762818..38767322hg19UCSC Ensembl
Cytoband15q14
Allele length
AssemblyAllele length
hg384505
hg194505
Variant TypeCNV deletion
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusM
Merged Variants
Supporting Variantsnssv15825818
Samples
Known GenesFAM98B
MethodSequencing
AnalysisSV calls were generated using multi-algorithm consensus pipeline involving raw evidence assessment, filtering, clustering, genotyping, alternative allele structure resolution, and gene annotation. These methods are described in detail in the gnomAD-SV preprint [Collins*, Brand*, et al., bioRxiv (2019)|https://www.biorxiv.org/content/10.1101/578674v1], and are largely based on methods developed in [Werling et al., Nat. Genet. (2018)|https://www.ncbi.nlm.nih.gov/pubmed/29700473].
Platform
Comments
ReferencegnomAD_Structural_Variants
Pubmed ID32461652
Accession Number(s)nsv4249803
Frequency
Sample Size10847
Observed Gain0
Observed Loss1
Observed Complex0
Frequencyn/a


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