A curated catalogue of human genomic structural variation




Variant Details

Variant: nsv4246812



Internal ID20442036
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
chr16:29072121..29103885hg38UCSC Ensembl
chr16:29083442..29115206hg19UCSC Ensembl
Cytoband16p11.2
Allele length
AssemblyAllele length
hg3831765
hg1931765
Variant TypeCNV deletion
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusM
Merged Variants
Supporting Variantsnssv15829667
Samples
Known GenesRRN3P2
MethodSequencing
AnalysisSV calls were generated using multi-algorithm consensus pipeline involving raw evidence assessment, filtering, clustering, genotyping, alternative allele structure resolution, and gene annotation. These methods are described in detail in the gnomAD-SV preprint [Collins*, Brand*, et al., bioRxiv (2019)|https://www.biorxiv.org/content/10.1101/578674v1], and are largely based on methods developed in [Werling et al., Nat. Genet. (2018)|https://www.ncbi.nlm.nih.gov/pubmed/29700473].
Platform
Comments
ReferencegnomAD_Structural_Variants
Pubmed ID32461652
Accession Number(s)nsv4246812
Frequency
Sample Size10847
Observed Gain0
Observed Loss1
Observed Complex0
Frequencyn/a


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