A curated catalogue of human genomic structural variation




Variant Details

Variant: nsv4243498



Internal ID20093130
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
chr16:87381977..87392340hg38UCSC Ensembl
chr16:87415583..87425946hg19UCSC Ensembl
Cytoband16q24.2
Allele length
AssemblyAllele length
hg3810364
hg1910364
Variant TypeCNV duplication
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusM
Merged Variants
Supporting Variantsnssv15957705
Samples
Known GenesFBXO31, MAP1LC3B
MethodSequencing
AnalysisSV calls were generated using multi-algorithm consensus pipeline involving raw evidence assessment, filtering, clustering, genotyping, alternative allele structure resolution, and gene annotation. These methods are described in detail in the gnomAD-SV preprint [Collins*, Brand*, et al., bioRxiv (2019)|https://www.biorxiv.org/content/10.1101/578674v1], and are largely based on methods developed in [Werling et al., Nat. Genet. (2018)|https://www.ncbi.nlm.nih.gov/pubmed/29700473].
Platform
Comments
ReferencegnomAD_Structural_Variants
Pubmed ID12345678
Accession Number(s)nsv4243498
Frequency
Sample Size10847
Observed Gain1
Observed Loss0
Observed Complex0
Frequencyn/a


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