A curated catalogue of human genomic structural variation




Variant Details

Variant: nsv4242858



Internal ID20439405
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
chr16:24356659..24357210hg38UCSC Ensembl
chr16:24367980..24368531hg19UCSC Ensembl
Cytoband16p12.1
Allele length
AssemblyAllele length
hg38552
hg19552
Variant TypeCNV duplication
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusM
Merged Variants
Supporting Variantsnssv15953282
Samples
Known GenesCACNG3
MethodSequencing
AnalysisSV calls were generated using multi-algorithm consensus pipeline involving raw evidence assessment, filtering, clustering, genotyping, alternative allele structure resolution, and gene annotation. These methods are described in detail in the gnomAD-SV preprint [Collins*, Brand*, et al., bioRxiv (2019)|https://www.biorxiv.org/content/10.1101/578674v1], and are largely based on methods developed in [Werling et al., Nat. Genet. (2018)|https://www.ncbi.nlm.nih.gov/pubmed/29700473].
Platform
Comments
ReferencegnomAD_Structural_Variants
Pubmed ID32461652
Accession Number(s)nsv4242858
Frequency
Sample Size10847
Observed Gain1
Observed Loss0
Observed Complex0
Frequencyn/a


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