A curated catalogue of human genomic structural variation




Variant Details

Variant: nsv4241799



Internal ID20438690
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
chr15:35335363..35441577hg38UCSC Ensembl
chr15:35627564..35733778hg19UCSC Ensembl
Cytoband15q14
Allele length
AssemblyAllele length
hg38106215
hg19106215
Variant TypeCNV deletion
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusM
Merged Variants
Supporting Variantsnssv15822767
Samples
Known GenesDPH6, MIR3942
MethodSequencing
AnalysisSV calls were generated using multi-algorithm consensus pipeline involving raw evidence assessment, filtering, clustering, genotyping, alternative allele structure resolution, and gene annotation. These methods are described in detail in the gnomAD-SV preprint [Collins*, Brand*, et al., bioRxiv (2019)|https://www.biorxiv.org/content/10.1101/578674v1], and are largely based on methods developed in [Werling et al., Nat. Genet. (2018)|https://www.ncbi.nlm.nih.gov/pubmed/29700473].
Platform
Comments
ReferencegnomAD_Structural_Variants
Pubmed ID32461652
Accession Number(s)nsv4241799
Frequency
Sample Size10847
Observed Gain0
Observed Loss1
Observed Complex0
Frequencyn/a


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