A curated catalogue of human genomic structural variation




Variant Details

Variant: nsv4240789



Internal ID20438056
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
chr16:89673633..89684372hg38UCSC Ensembl
chr16:89740041..89750780hg19UCSC Ensembl
Cytoband16q24.3
Allele length
AssemblyAllele length
hg3810740
hg1910740
Variant TypeCNV deletion
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusM
Merged Variantsdgv941n166
Supporting Variantsnssv15832203
Samples
Known Genes
MethodSequencing
AnalysisSV calls were generated using multi-algorithm consensus pipeline involving raw evidence assessment, filtering, clustering, genotyping, alternative allele structure resolution, and gene annotation. These methods are described in detail in the gnomAD-SV preprint [Collins*, Brand*, et al., bioRxiv (2019)|https://www.biorxiv.org/content/10.1101/578674v1], and are largely based on methods developed in [Werling et al., Nat. Genet. (2018)|https://www.ncbi.nlm.nih.gov/pubmed/29700473].
Platform
Comments
ReferencegnomAD_Structural_Variants
Pubmed ID32461652
Accession Number(s)nsv4240789
Frequency
Sample Size10847
Observed Gain0
Observed Loss1
Observed Complex0
Frequencyn/a


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