A curated catalogue of human genomic structural variation




Variant Details

Variant: nsv4239768



Internal ID20437385
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
chr16:30335281..30336397hg38UCSC Ensembl
chr16:30346602..30347718hg19UCSC Ensembl
Cytoband16p11.2
Allele length
AssemblyAllele length
hg381117
hg191117
Variant TypeCNV deletion
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusM
Merged Variants
Supporting Variantsnssv15830306
Samples
Known GenesLOC595101
MethodSequencing
AnalysisSV calls were generated using multi-algorithm consensus pipeline involving raw evidence assessment, filtering, clustering, genotyping, alternative allele structure resolution, and gene annotation. These methods are described in detail in the gnomAD-SV preprint [Collins*, Brand*, et al., bioRxiv (2019)|https://www.biorxiv.org/content/10.1101/578674v1], and are largely based on methods developed in [Werling et al., Nat. Genet. (2018)|https://www.ncbi.nlm.nih.gov/pubmed/29700473].
Platform
Comments
ReferencegnomAD_Structural_Variants
Pubmed ID32461652
Accession Number(s)nsv4239768
Frequency
Sample Size10847
Observed Gain0
Observed Loss1
Observed Complex0
Frequencyn/a


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