A curated catalogue of human genomic structural variation




Variant Details

Variant: nsv4233738



Internal ID20086606
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
chr17:7924254..7955485hg38UCSC Ensembl
chr17:7827572..7858803hg19UCSC Ensembl
Cytoband17p13.1
Allele length
AssemblyAllele length
hg3831232
hg1931232
Variant TypeCNV duplication
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusM
Merged Variants
Supporting Variantsnssv15959247
Samples
Known GenesCNTROB, KCNAB3, TRAPPC1
MethodSequencing
AnalysisSV calls were generated using multi-algorithm consensus pipeline involving raw evidence assessment, filtering, clustering, genotyping, alternative allele structure resolution, and gene annotation. These methods are described in detail in the gnomAD-SV preprint [Collins*, Brand*, et al., bioRxiv (2019)|https://www.biorxiv.org/content/10.1101/578674v1], and are largely based on methods developed in [Werling et al., Nat. Genet. (2018)|https://www.ncbi.nlm.nih.gov/pubmed/29700473].
Platform
Comments
ReferencegnomAD_Structural_Variants
Pubmed ID12345678
Accession Number(s)nsv4233738
Frequency
Sample Size10847
Observed Gain1
Observed Loss0
Observed Complex0
Frequencyn/a


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