A curated catalogue of human genomic structural variation




Variant Details

Variant: nsv4230475



Internal ID20430995
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
chr13:29392854..29416091hg38UCSC Ensembl
chr13:29966991..29990228hg19UCSC Ensembl
Cytoband13q12.3
Allele length
AssemblyAllele length
hg3823238
hg1923238
Variant TypeCNV deletion
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusM
Merged Variants
Supporting Variantsnssv15813165
Samples
Known GenesMTUS2
MethodSequencing
AnalysisSV calls were generated using multi-algorithm consensus pipeline involving raw evidence assessment, filtering, clustering, genotyping, alternative allele structure resolution, and gene annotation. These methods are described in detail in the gnomAD-SV preprint [Collins*, Brand*, et al., bioRxiv (2019)|https://www.biorxiv.org/content/10.1101/578674v1], and are largely based on methods developed in [Werling et al., Nat. Genet. (2018)|https://www.ncbi.nlm.nih.gov/pubmed/29700473].
Platform
Comments
ReferencegnomAD_Structural_Variants
Pubmed ID32461652
Accession Number(s)nsv4230475
Frequency
Sample Size10847
Observed Gain0
Observed Loss1
Observed Complex0
Frequencyn/a


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