A curated catalogue of human genomic structural variation




Variant Details

Variant: nsv4229894



Internal ID20430598
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
chr13:105498233..105539219hg38UCSC Ensembl
chr13:106150582..106191568hg19UCSC Ensembl
Cytoband13q33.2
Allele length
AssemblyAllele length
hg3840987
hg1940987
Variant TypeCNV deletion
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusM
Merged Variantsdgv682n166
Supporting Variantsnssv15819993
Samples
Known GenesDAOA-AS1
MethodSequencing
AnalysisSV calls were generated using multi-algorithm consensus pipeline involving raw evidence assessment, filtering, clustering, genotyping, alternative allele structure resolution, and gene annotation. These methods are described in detail in the gnomAD-SV preprint [Collins*, Brand*, et al., bioRxiv (2019)|https://www.biorxiv.org/content/10.1101/578674v1], and are largely based on methods developed in [Werling et al., Nat. Genet. (2018)|https://www.ncbi.nlm.nih.gov/pubmed/29700473].
Platform
Comments
ReferencegnomAD_Structural_Variants
Pubmed ID32461652
Accession Number(s)nsv4229894
Frequency
Sample Size10847
Observed Gain0
Observed Loss1
Observed Complex0
Frequencyn/a


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