A curated catalogue of human genomic structural variation




Variant Details

Variant: nsv4221897



Internal ID20424906
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
chr14:90038259..90173805hg38UCSC Ensembl
chr14:90504603..90640149hg19UCSC Ensembl
Cytoband14q32.11
Allele length
AssemblyAllele length
hg38135547
hg19135547
Variant TypeCNV duplication
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusM
Merged Variants
Supporting Variantsnssv15952575
Samples
Known GenesKCNK13, TDP1
MethodSequencing
AnalysisSV calls were generated using multi-algorithm consensus pipeline involving raw evidence assessment, filtering, clustering, genotyping, alternative allele structure resolution, and gene annotation. These methods are described in detail in the gnomAD-SV preprint [Collins*, Brand*, et al., bioRxiv (2019)|https://www.biorxiv.org/content/10.1101/578674v1], and are largely based on methods developed in [Werling et al., Nat. Genet. (2018)|https://www.ncbi.nlm.nih.gov/pubmed/29700473].
Platform
Comments
ReferencegnomAD_Structural_Variants
Pubmed ID32461652
Accession Number(s)nsv4221897
Frequency
Sample Size10847
Observed Gain1
Observed Loss0
Observed Complex0
Frequencyn/a


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