A curated catalogue of human genomic structural variation




Variant Details

Variant: nsv4220380



Internal ID20423838
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
chr14:59542784..59544146hg38UCSC Ensembl
chr14:60009502..60010864hg19UCSC Ensembl
Cytoband14q23.1
Allele length
AssemblyAllele length
hg381363
hg191363
Variant TypeCNV deletion
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusM
Merged Variants
Supporting Variantsnssv15821779
Samples
Known GenesCCDC175
MethodSequencing
AnalysisSV calls were generated using multi-algorithm consensus pipeline involving raw evidence assessment, filtering, clustering, genotyping, alternative allele structure resolution, and gene annotation. These methods are described in detail in the gnomAD-SV preprint [Collins*, Brand*, et al., bioRxiv (2019)|https://www.biorxiv.org/content/10.1101/578674v1], and are largely based on methods developed in [Werling et al., Nat. Genet. (2018)|https://www.ncbi.nlm.nih.gov/pubmed/29700473].
Platform
Comments
ReferencegnomAD_Structural_Variants
Pubmed ID32461652
Accession Number(s)nsv4220380
Frequency
Sample Size10847
Observed Gain0
Observed Loss1
Observed Complex0
Frequencyn/a


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