A curated catalogue of human genomic structural variation




Variant Details

Variant: nsv4220115



Internal ID20423651
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
chr13:96615843..96636930hg38UCSC Ensembl
chr13:97268097..97289184hg19UCSC Ensembl
Cytoband13q32.1
Allele length
AssemblyAllele length
hg3821088
hg1921088
Variant TypeCNV duplication
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusM
Merged Variants
Supporting Variantsnssv15955349
Samples
Known GenesHS6ST3
MethodSequencing
AnalysisSV calls were generated using multi-algorithm consensus pipeline involving raw evidence assessment, filtering, clustering, genotyping, alternative allele structure resolution, and gene annotation. These methods are described in detail in the gnomAD-SV preprint [Collins*, Brand*, et al., bioRxiv (2019)|https://www.biorxiv.org/content/10.1101/578674v1], and are largely based on methods developed in [Werling et al., Nat. Genet. (2018)|https://www.ncbi.nlm.nih.gov/pubmed/29700473].
Platform
Comments
ReferencegnomAD_Structural_Variants
Pubmed ID32461652
Accession Number(s)nsv4220115
Frequency
Sample Size10847
Observed Gain1
Observed Loss0
Observed Complex0
Frequencyn/a


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