A curated catalogue of human genomic structural variation




Variant Details

Variant: nsv4218410



Internal ID20075760
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
chr13:49314432..49317142hg38UCSC Ensembl
chr13:49888568..49891278hg19UCSC Ensembl
Cytoband13q14.2
Allele length
AssemblyAllele length
hg382711
hg192711
Variant TypeCNV deletion
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusM
Merged Variants
Supporting Variantsnssv15816139
Samples
Known GenesCAB39L
MethodSequencing
AnalysisSV calls were generated using multi-algorithm consensus pipeline involving raw evidence assessment, filtering, clustering, genotyping, alternative allele structure resolution, and gene annotation. These methods are described in detail in the gnomAD-SV preprint [Collins*, Brand*, et al., bioRxiv (2019)|https://www.biorxiv.org/content/10.1101/578674v1], and are largely based on methods developed in [Werling et al., Nat. Genet. (2018)|https://www.ncbi.nlm.nih.gov/pubmed/29700473].
Platform
Comments
ReferencegnomAD_Structural_Variants
Pubmed ID12345678
Accession Number(s)nsv4218410
Frequency
Sample Size10847
Observed Gain0
Observed Loss1
Observed Complex0
Frequencyn/a


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