A curated catalogue of human genomic structural variation




Variant Details

Variant: nsv4216022



Internal ID20074050
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
chr14:80840597..81066940hg38UCSC Ensembl
chr14:81306941..81533284hg19UCSC Ensembl
Cytoband14q31.1
Allele length
AssemblyAllele length
hg38226344
hg19226344
Variant TypeCNV duplication
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusM
Merged Variants
Supporting Variantsnssv15952812
Samples
Known GenesCEP128, TSHR
MethodSequencing
AnalysisSV calls were generated using multi-algorithm consensus pipeline involving raw evidence assessment, filtering, clustering, genotyping, alternative allele structure resolution, and gene annotation. These methods are described in detail in the gnomAD-SV preprint [Collins*, Brand*, et al., bioRxiv (2019)|https://www.biorxiv.org/content/10.1101/578674v1], and are largely based on methods developed in [Werling et al., Nat. Genet. (2018)|https://www.ncbi.nlm.nih.gov/pubmed/29700473].
Platform
Comments
ReferencegnomAD_Structural_Variants
Pubmed ID12345678
Accession Number(s)nsv4216022
Frequency
Sample Size10847
Observed Gain1
Observed Loss0
Observed Complex0
Frequencyn/a


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