A curated catalogue of human genomic structural variation




Variant Details

Variant: nsv4215952



Internal ID20420691
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
chr12:85816702..85819090hg38UCSC Ensembl
chr12:86210480..86212868hg19UCSC Ensembl
Cytoband12q21.31
Allele length
AssemblyAllele length
hg382389
hg192389
Variant TypeCNV deletion
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusM
Merged Variants
Supporting Variantsnssv15812500
Samples
Known GenesRASSF9
MethodSequencing
AnalysisSV calls were generated using multi-algorithm consensus pipeline involving raw evidence assessment, filtering, clustering, genotyping, alternative allele structure resolution, and gene annotation. These methods are described in detail in the gnomAD-SV preprint [Collins*, Brand*, et al., bioRxiv (2019)|https://www.biorxiv.org/content/10.1101/578674v1], and are largely based on methods developed in [Werling et al., Nat. Genet. (2018)|https://www.ncbi.nlm.nih.gov/pubmed/29700473].
Platform
Comments
ReferencegnomAD_Structural_Variants
Pubmed ID32461652
Accession Number(s)nsv4215952
Frequency
Sample Size10847
Observed Gain0
Observed Loss1
Observed Complex0
Frequencyn/a


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