A curated catalogue of human genomic structural variation




Variant Details

Variant: nsv4215577



Internal ID20073742
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
chr12:128084649..128087714hg38UCSC Ensembl
chr12:128569194..128572259hg19UCSC Ensembl
Cytoband12q24.32
Allele length
AssemblyAllele length
hg383066
hg193066
Variant TypeCNV deletion
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusM
Merged Variants
Supporting Variantsnssv15814889
Samples
Known GenesLOC100996679
MethodSequencing
AnalysisSV calls were generated using multi-algorithm consensus pipeline involving raw evidence assessment, filtering, clustering, genotyping, alternative allele structure resolution, and gene annotation. These methods are described in detail in the gnomAD-SV preprint [Collins*, Brand*, et al., bioRxiv (2019)|https://www.biorxiv.org/content/10.1101/578674v1], and are largely based on methods developed in [Werling et al., Nat. Genet. (2018)|https://www.ncbi.nlm.nih.gov/pubmed/29700473].
Platform
Comments
ReferencegnomAD_Structural_Variants
Pubmed ID12345678
Accession Number(s)nsv4215577
Frequency
Sample Size10847
Observed Gain0
Observed Loss1
Observed Complex0
Frequencyn/a


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