A curated catalogue of human genomic structural variation




Variant Details

Variant: nsv4210293



Internal ID20069941
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
chr10:122478215..122566021hg38UCSC Ensembl
chr10:124237731..124325537hg19UCSC Ensembl
Cytoband10q26.13
Allele length
AssemblyAllele length
hg3887807
hg1987807
Variant TypeCNV duplication
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusM
Merged Variants
Supporting Variantsnssv15948939
Samples
Known GenesDMBT1, HTRA1
MethodSequencing
AnalysisSV calls were generated using multi-algorithm consensus pipeline involving raw evidence assessment, filtering, clustering, genotyping, alternative allele structure resolution, and gene annotation. These methods are described in detail in the gnomAD-SV preprint [Collins*, Brand*, et al., bioRxiv (2019)|https://www.biorxiv.org/content/10.1101/578674v1], and are largely based on methods developed in [Werling et al., Nat. Genet. (2018)|https://www.ncbi.nlm.nih.gov/pubmed/29700473].
Platform
Comments
ReferencegnomAD_Structural_Variants
Pubmed ID12345678
Accession Number(s)nsv4210293
Frequency
Sample Size10847
Observed Gain1
Observed Loss0
Observed Complex0
Frequencyn/a


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