A curated catalogue of human genomic structural variation




Variant Details

Variant: nsv4209545



Internal ID20416089
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
chr11:2299770..2328770hg38UCSC Ensembl
chr11:2321000..2350000hg19UCSC Ensembl
Cytoband11p15.5
Allele length
AssemblyAllele length
hg3829001
hg1929001
Variant TypeCNV duplication
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusM
Merged Variants
Supporting Variantsnssv15952243
Samples
Known GenesC11orf21, CD81-AS1, TSPAN32
MethodSequencing
AnalysisSV calls were generated using multi-algorithm consensus pipeline involving raw evidence assessment, filtering, clustering, genotyping, alternative allele structure resolution, and gene annotation. These methods are described in detail in the gnomAD-SV preprint [Collins*, Brand*, et al., bioRxiv (2019)|https://www.biorxiv.org/content/10.1101/578674v1], and are largely based on methods developed in [Werling et al., Nat. Genet. (2018)|https://www.ncbi.nlm.nih.gov/pubmed/29700473].
Platform
Comments
ReferencegnomAD_Structural_Variants
Pubmed ID32461652
Accession Number(s)nsv4209545
Frequency
Sample Size10847
Observed Gain1
Observed Loss0
Observed Complex0
Frequencyn/a


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