A curated catalogue of human genomic structural variation




Variant Details

Variant: nsv4209363



Internal ID20415966
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
chr11:72655070..72660353hg38UCSC Ensembl
chr11:72366114..72371397hg19UCSC Ensembl
Cytoband11q13.4
Allele length
AssemblyAllele length
hg385284
hg195284
Variant TypeCNV deletion
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusM
Merged Variants
Supporting Variantsnssv15801829
Samples
Known GenesPDE2A
MethodSequencing
AnalysisSV calls were generated using multi-algorithm consensus pipeline involving raw evidence assessment, filtering, clustering, genotyping, alternative allele structure resolution, and gene annotation. These methods are described in detail in the gnomAD-SV preprint [Collins*, Brand*, et al., bioRxiv (2019)|https://www.biorxiv.org/content/10.1101/578674v1], and are largely based on methods developed in [Werling et al., Nat. Genet. (2018)|https://www.ncbi.nlm.nih.gov/pubmed/29700473].
Platform
Comments
ReferencegnomAD_Structural_Variants
Pubmed ID32461652
Accession Number(s)nsv4209363
Frequency
Sample Size10847
Observed Gain0
Observed Loss1
Observed Complex0
Frequencyn/a


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