A curated catalogue of human genomic structural variation




Variant Details

Variant: nsv4209280



Internal ID20069222
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
chr11:67578426..67641726hg38UCSC Ensembl
chr11:67345897..67409197hg19UCSC Ensembl
Cytoband11q13.2
Allele length
AssemblyAllele length
hg3863301
hg1963301
Variant TypeCNV duplication
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusM
Merged Variants
Supporting Variantsnssv15947425
Samples
Known GenesDOC2GP, GSTP1, NDUFV1, NUDT8, TBX10
MethodSequencing
AnalysisSV calls were generated using multi-algorithm consensus pipeline involving raw evidence assessment, filtering, clustering, genotyping, alternative allele structure resolution, and gene annotation. These methods are described in detail in the gnomAD-SV preprint [Collins*, Brand*, et al., bioRxiv (2019)|https://www.biorxiv.org/content/10.1101/578674v1], and are largely based on methods developed in [Werling et al., Nat. Genet. (2018)|https://www.ncbi.nlm.nih.gov/pubmed/29700473].
Platform
Comments
ReferencegnomAD_Structural_Variants
Pubmed ID12345678
Accession Number(s)nsv4209280
Frequency
Sample Size10847
Observed Gain1
Observed Loss0
Observed Complex0
Frequencyn/a


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