A curated catalogue of human genomic structural variation




Variant Details

Variant: nsv4202388



Internal ID20410896
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
chr11:122939132..122943003hg38UCSC Ensembl
chr11:122809840..122813711hg19UCSC Ensembl
Cytoband11q24.1
Allele length
AssemblyAllele length
hg383872
hg193872
Variant TypeCNV deletion
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusM
Merged Variants
Supporting Variantsnssv15805631
Samples
Known GenesC11orf63
MethodSequencing
AnalysisSV calls were generated using multi-algorithm consensus pipeline involving raw evidence assessment, filtering, clustering, genotyping, alternative allele structure resolution, and gene annotation. These methods are described in detail in the gnomAD-SV preprint [Collins*, Brand*, et al., bioRxiv (2019)|https://www.biorxiv.org/content/10.1101/578674v1], and are largely based on methods developed in [Werling et al., Nat. Genet. (2018)|https://www.ncbi.nlm.nih.gov/pubmed/29700473].
Platform
Comments
ReferencegnomAD_Structural_Variants
Pubmed ID32461652
Accession Number(s)nsv4202388
Frequency
Sample Size10847
Observed Gain0
Observed Loss1
Observed Complex0
Frequencyn/a


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