A curated catalogue of human genomic structural variation




Variant Details

Variant: nsv4200729



Internal ID20063030
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
chr11:130798692..131092934hg38UCSC Ensembl
chr11:130668587..130962829hg19UCSC Ensembl
Cytoband11q24.3
Allele length
AssemblyAllele length
hg38294243
hg19294243
Variant TypeCNV duplication
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusM
Merged Variants
Supporting Variantsnssv15954340
Samples
Known GenesSNX19
MethodSequencing
AnalysisSV calls were generated using multi-algorithm consensus pipeline involving raw evidence assessment, filtering, clustering, genotyping, alternative allele structure resolution, and gene annotation. These methods are described in detail in the gnomAD-SV preprint [Collins*, Brand*, et al., bioRxiv (2019)|https://www.biorxiv.org/content/10.1101/578674v1], and are largely based on methods developed in [Werling et al., Nat. Genet. (2018)|https://www.ncbi.nlm.nih.gov/pubmed/29700473].
Platform
Comments
ReferencegnomAD_Structural_Variants
Pubmed ID12345678
Accession Number(s)nsv4200729
Frequency
Sample Size10847
Observed Gain1
Observed Loss0
Observed Complex0
Frequencyn/a


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