A curated catalogue of human genomic structural variation




Variant Details

Variant: nsv4200198



Internal ID20409319
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
chr11:67671684..67905821hg38UCSC Ensembl
chr11:67439155..67673292hg19UCSC Ensembl
Cytoband11q13.2
Allele length
AssemblyAllele length
hg38234138
hg19234138
Variant TypeCNV duplication
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusM
Merged Variants
Supporting Variantsnssv15947429
Samples
Known GenesALDH3B2, FAM86C2P
MethodSequencing
AnalysisSV calls were generated using multi-algorithm consensus pipeline involving raw evidence assessment, filtering, clustering, genotyping, alternative allele structure resolution, and gene annotation. These methods are described in detail in the gnomAD-SV preprint [Collins*, Brand*, et al., bioRxiv (2019)|https://www.biorxiv.org/content/10.1101/578674v1], and are largely based on methods developed in [Werling et al., Nat. Genet. (2018)|https://www.ncbi.nlm.nih.gov/pubmed/29700473].
Platform
Comments
ReferencegnomAD_Structural_Variants
Pubmed ID32461652
Accession Number(s)nsv4200198
Frequency
Sample Size10847
Observed Gain1
Observed Loss0
Observed Complex0
Frequencyn/a


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