A curated catalogue of human genomic structural variation




Variant Details

Variant: nsv4194873



Internal ID20405464
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
chr11:90272538..90598455hg38UCSC Ensembl
chr11:90005706..90331623hg19UCSC Ensembl
Cytoband11q14.3
Allele length
AssemblyAllele length
hg38325918
hg19325918
Variant TypeCNV duplication
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusM
Merged Variants
Supporting Variantsnssv15948388
Samples
Known GenesDISC1FP1, MIR4490
MethodSequencing
AnalysisSV calls were generated using multi-algorithm consensus pipeline involving raw evidence assessment, filtering, clustering, genotyping, alternative allele structure resolution, and gene annotation. These methods are described in detail in the gnomAD-SV preprint [Collins*, Brand*, et al., bioRxiv (2019)|https://www.biorxiv.org/content/10.1101/578674v1], and are largely based on methods developed in [Werling et al., Nat. Genet. (2018)|https://www.ncbi.nlm.nih.gov/pubmed/29700473].
Platform
Comments
ReferencegnomAD_Structural_Variants
Pubmed ID32461652
Accession Number(s)nsv4194873
Frequency
Sample Size10847
Observed Gain1
Observed Loss0
Observed Complex0
Frequencyn/a


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