A curated catalogue of human genomic structural variation




Variant Details

Variant: nsv4191180



Internal ID20056083
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
chr10:48178757..48319957hg38UCSC Ensembl
chr10:49386800..49528000hg19UCSC Ensembl
Cytoband10q11.22
Allele length
AssemblyAllele length
hg38141201
hg19141201
Variant TypeCNV duplication
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusM
Merged Variants
Supporting Variantsnssv15947943
Samples
Known GenesFRMPD2, MAPK8
MethodSequencing
AnalysisSV calls were generated using multi-algorithm consensus pipeline involving raw evidence assessment, filtering, clustering, genotyping, alternative allele structure resolution, and gene annotation. These methods are described in detail in the gnomAD-SV preprint [Collins*, Brand*, et al., bioRxiv (2019)|https://www.biorxiv.org/content/10.1101/578674v1], and are largely based on methods developed in [Werling et al., Nat. Genet. (2018)|https://www.ncbi.nlm.nih.gov/pubmed/29700473].
Platform
Comments
ReferencegnomAD_Structural_Variants
Pubmed ID12345678
Accession Number(s)nsv4191180
Frequency
Sample Size10847
Observed Gain1
Observed Loss0
Observed Complex0
Frequencyn/a


Hosted by The Centre for Applied Genomics
Grant support for DGV
Please read the usage disclaimer