A curated catalogue of human genomic structural variation




Variant Details

Variant: nsv4189988



Internal ID20401918
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
chr9:73933768..74005631hg38UCSC Ensembl
chr9:76548684..76620547hg19UCSC Ensembl
Cytoband9q21.13
Allele length
AssemblyAllele length
hg3871864
hg1971864
Variant TypeCNV duplication
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusM
Merged Variants
Supporting Variantsnssv15986741
Samples
Known GenesMIR6130
MethodSequencing
AnalysisSV calls were generated using multi-algorithm consensus pipeline involving raw evidence assessment, filtering, clustering, genotyping, alternative allele structure resolution, and gene annotation. These methods are described in detail in the gnomAD-SV preprint [Collins*, Brand*, et al., bioRxiv (2019)|https://www.biorxiv.org/content/10.1101/578674v1], and are largely based on methods developed in [Werling et al., Nat. Genet. (2018)|https://www.ncbi.nlm.nih.gov/pubmed/29700473].
Platform
Comments
ReferencegnomAD_Structural_Variants
Pubmed ID32461652
Accession Number(s)nsv4189988
Frequency
Sample Size10847
Observed Gain1
Observed Loss0
Observed Complex0
Frequencyn/a


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