A curated catalogue of human genomic structural variation




Variant Details

Variant: nsv4187529



Internal ID20400114
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
chr9:16889041..16903236hg38UCSC Ensembl
chr9:16889039..16903234hg19UCSC Ensembl
Cytoband9p22.2
Allele length
AssemblyAllele length
hg3814196
hg1914196
Variant TypeCNV deletion
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusM
Merged Variantsdgv2732n166
Supporting Variantsnssv15934988
Samples
Known Genes
MethodSequencing
AnalysisSV calls were generated using multi-algorithm consensus pipeline involving raw evidence assessment, filtering, clustering, genotyping, alternative allele structure resolution, and gene annotation. These methods are described in detail in the gnomAD-SV preprint [Collins*, Brand*, et al., bioRxiv (2019)|https://www.biorxiv.org/content/10.1101/578674v1], and are largely based on methods developed in [Werling et al., Nat. Genet. (2018)|https://www.ncbi.nlm.nih.gov/pubmed/29700473].
Platform
Comments
ReferencegnomAD_Structural_Variants
Pubmed ID32461652
Accession Number(s)nsv4187529
Frequency
Sample Size10847
Observed Gain0
Observed Loss1
Observed Complex0
Frequencyn/a


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