A curated catalogue of human genomic structural variation




Variant Details

Variant: nsv4181836



Internal ID20396071
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
chr10:13057445..13067528hg38UCSC Ensembl
chr10:13099445..13109528hg19UCSC Ensembl
Cytoband10p13
Allele length
AssemblyAllele length
hg3810084
hg1910084
Variant TypeCNV deletion
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusM
Merged Variants
Supporting Variantsnssv15792563
Samples
Known GenesCCDC3
MethodSequencing
AnalysisSV calls were generated using multi-algorithm consensus pipeline involving raw evidence assessment, filtering, clustering, genotyping, alternative allele structure resolution, and gene annotation. These methods are described in detail in the gnomAD-SV preprint [Collins*, Brand*, et al., bioRxiv (2019)|https://www.biorxiv.org/content/10.1101/578674v1], and are largely based on methods developed in [Werling et al., Nat. Genet. (2018)|https://www.ncbi.nlm.nih.gov/pubmed/29700473].
Platform
Comments
ReferencegnomAD_Structural_Variants
Pubmed ID32461652
Accession Number(s)nsv4181836
Frequency
Sample Size10847
Observed Gain0
Observed Loss1
Observed Complex0
Frequencyn/a


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