A curated catalogue of human genomic structural variation




Variant Details

Variant: nsv4175968



Internal ID20391917
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
chr10:87726349..87726779hg38UCSC Ensembl
chr10:89486106..89486536hg19UCSC Ensembl
Cytoband10q23.2
Allele length
AssemblyAllele length
hg38431
hg19431
Variant TypeCNV duplication
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusM
Merged Variants
Supporting Variantsnssv15951538
Samples
Known GenesPAPSS2
MethodSequencing
AnalysisSV calls were generated using multi-algorithm consensus pipeline involving raw evidence assessment, filtering, clustering, genotyping, alternative allele structure resolution, and gene annotation. These methods are described in detail in the gnomAD-SV preprint [Collins*, Brand*, et al., bioRxiv (2019)|https://www.biorxiv.org/content/10.1101/578674v1], and are largely based on methods developed in [Werling et al., Nat. Genet. (2018)|https://www.ncbi.nlm.nih.gov/pubmed/29700473].
Platform
Comments
ReferencegnomAD_Structural_Variants
Pubmed ID32461652
Accession Number(s)nsv4175968
Frequency
Sample Size10847
Observed Gain1
Observed Loss0
Observed Complex0
Frequencyn/a


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