A curated catalogue of human genomic structural variation




Variant Details

Variant: nsv4175517



Internal ID20044900
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
chr10:61866241..61921241hg38UCSC Ensembl
chr10:63626000..63681000hg19UCSC Ensembl
Cytoband10q21.2
Allele length
AssemblyAllele length
hg3855001
hg1955001
Variant TypeCNV duplication
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusM
Merged Variants
Supporting Variantsnssv15947982
Samples
Known GenesARID5B
MethodSequencing
AnalysisSV calls were generated using multi-algorithm consensus pipeline involving raw evidence assessment, filtering, clustering, genotyping, alternative allele structure resolution, and gene annotation. These methods are described in detail in the gnomAD-SV preprint [Collins*, Brand*, et al., bioRxiv (2019)|https://www.biorxiv.org/content/10.1101/578674v1], and are largely based on methods developed in [Werling et al., Nat. Genet. (2018)|https://www.ncbi.nlm.nih.gov/pubmed/29700473].
Platform
Comments
ReferencegnomAD_Structural_Variants
Pubmed ID12345678
Accession Number(s)nsv4175517
Frequency
Sample Size10847
Observed Gain1
Observed Loss0
Observed Complex0
Frequencyn/a


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