A curated catalogue of human genomic structural variation




Variant Details

Variant: nsv4172078



Internal ID20389147
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
chr8:38277188..38278194hg38UCSC Ensembl
chr8:38134706..38135712hg19UCSC Ensembl
Cytoband8p11.23
Allele length
AssemblyAllele length
hg381007
hg191007
Variant TypeCNV duplication
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusM
Merged Variants
Supporting Variantsnssv15983523
Samples
Known GenesWHSC1L1
MethodSequencing
AnalysisSV calls were generated using multi-algorithm consensus pipeline involving raw evidence assessment, filtering, clustering, genotyping, alternative allele structure resolution, and gene annotation. These methods are described in detail in the gnomAD-SV preprint [Collins*, Brand*, et al., bioRxiv (2019)|https://www.biorxiv.org/content/10.1101/578674v1], and are largely based on methods developed in [Werling et al., Nat. Genet. (2018)|https://www.ncbi.nlm.nih.gov/pubmed/29700473].
Platform
Comments
ReferencegnomAD_Structural_Variants
Pubmed ID32461652
Accession Number(s)nsv4172078
Frequency
Sample Size10847
Observed Gain1
Observed Loss0
Observed Complex0
Frequencyn/a


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