A curated catalogue of human genomic structural variation




Variant Details

Variant: nsv4170006



Internal ID20040967
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
chr7:107224433..107230314hg38UCSC Ensembl
chr7:106864878..106870759hg19UCSC Ensembl
Cytoband7q22.3
Allele length
AssemblyAllele length
hg385882
hg195882
Variant TypeCNV duplication
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusM
Merged Variants
Supporting Variantsnssv15982582
Samples
Known GenesCOG5
MethodSequencing
AnalysisSV calls were generated using multi-algorithm consensus pipeline involving raw evidence assessment, filtering, clustering, genotyping, alternative allele structure resolution, and gene annotation. These methods are described in detail in the gnomAD-SV preprint [Collins*, Brand*, et al., bioRxiv (2019)|https://www.biorxiv.org/content/10.1101/578674v1], and are largely based on methods developed in [Werling et al., Nat. Genet. (2018)|https://www.ncbi.nlm.nih.gov/pubmed/29700473].
Platform
Comments
ReferencegnomAD_Structural_Variants
Pubmed ID12345678
Accession Number(s)nsv4170006
Frequency
Sample Size10847
Observed Gain1
Observed Loss0
Observed Complex0
Frequencyn/a


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