A curated catalogue of human genomic structural variation




Variant Details

Variant: nsv4169272



Internal ID20040429
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
chr7:124553664..124841766hg38UCSC Ensembl
chr7:124193718..124481820hg19UCSC Ensembl
Cytoband7q31.33
Allele length
AssemblyAllele length
hg38288103
hg19288103
Variant TypeCNV duplication
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusM
Merged Variants
Supporting Variantsnssv15981429
Samples
Known GenesGPR37, LOC154872, POT1
MethodSequencing
AnalysisSV calls were generated using multi-algorithm consensus pipeline involving raw evidence assessment, filtering, clustering, genotyping, alternative allele structure resolution, and gene annotation. These methods are described in detail in the gnomAD-SV preprint [Collins*, Brand*, et al., bioRxiv (2019)|https://www.biorxiv.org/content/10.1101/578674v1], and are largely based on methods developed in [Werling et al., Nat. Genet. (2018)|https://www.ncbi.nlm.nih.gov/pubmed/29700473].
Platform
Comments
ReferencegnomAD_Structural_Variants
Pubmed ID12345678
Accession Number(s)nsv4169272
Frequency
Sample Size10847
Observed Gain1
Observed Loss0
Observed Complex0
Frequencyn/a


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